Author Archives: 51580558

A research with the former student of the lab has published.

A collaborative study of genome sequence with the former student of the lab is now published on Mammalian Genome . Saki Aoto, Mayu Fushimi, Kei Yura, Kohji Okamura (2020) Diversification of CpG-island promoters revealed by comparative analysis between human and rhesus monkey genomes. Mammalian Genome, 31, 240-251, doi:1007/s00335-020-09844-2.

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Yura Lab. on the process of reboot

After the turmoil of COVID-19 (not finished though) and rejuvenation of Science Building #1 (half done), the lab has relocated on the sixth floor in May 2021 and is rebooting now.

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Genome sequencing study on Teleogryllus occipitalis is published on Frontiers in Genetics

The lab has been studying on cricket genomes for a while and finally published a paper “The Draft Genome Dataset of the Asian Cricket Teleogryllus occipitalis for Molecular Research toward Entomophagy“ by Kosuke Kataoka, Ryuhei Minei, Keigo Ide, Atsushi Ogura, Haruko Takeyama, Makio N. Takeda Suzuki, Kei Yura and Toru Asahi on Frontiers in Genetics.

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A research of the attitude toward breast cancer among younger generation is published on Journal of Human Genetics

A study of the attitude toward breast cancer among younger generation is published on Journal of Human Genetics with the former student of the lab (Terui-Kohbata, H., Egawa, M., Yura, K., Yoshida, M. (2020) Knowledge and attitude of hereditary breast cancer among Japanese university female students) is now published on Journal of Human Genetics.

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A very old paper by Yura, K. et al on Protein Engineering is cited by Park, H., et al (2020) on Frontiers in Plant Science.

Yura, K., Tomoda, S., and Go, M. “Repeat of a helix-turn-helix module in DNA-binding proteins” in 1993 on Protein Engineering is cited in the manuscript “A LysR-Type Transcriptional Regulator LcrX Is Involved in Virulence, Biofilm Formation, Swimming Motility, Siderophore Secretion, and Growth in Sugar Sources in Xanthomonas axonopodis Pv. glycines” by Park, H., Do, E., Kim, M., Park, H-J., Lee, J., Han, S-W on Frontiers in Palan Science.

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The study on Vietnam otter clam genome from our lab by Kagaya, Y., Minei, R., et al is published.

A Vietnam otter clam study supported by Japan Society for the Promotion of Science is now published on Microbiology Resource Announcements. Yuki Kagaya, Ryuhei Minei, Ha T. T. Duong, Binh T. N. Le, Lua T. Dang, Trang T. H. Tran, Hoa T. Nguyen, Kengo Kinoshita, Kei Yura, Atsushi Ogura, Oanh T. P. Kim (2020) “Metagenome Sequences from the Environment of Diseased Otter Clams, Lutraria rhynchaena, from a Farm in Vietnam” 9:e01068-19.

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Hoshina, S. et al. on JBC is cited by Hulke, M.L. et al (2019) on Chromosome Research.

Hoshina S, Yura K, Teranishi H, Kiyasu N, Tominaga A, Kadoma H, Nakatsuka A, Kunichika T, Obuse C, Waga S (2013) “Human origin recognition complex binds preferentially to G-quadruplex-preferable RNA and single-stranded DNA” on Journal of Biological Chemistry is cited by Hulke, M.L. et al. (2019) “Genomic methods for measuring DNA replication dynamics“ on Chromosome Research.

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Yura et al. on DNA Research is cited by Bell, D., et al (2019) on American Journal of Botany.

Yura, K., Y. Miyata, T., Arikawa, M., Higuchi, M., Sugita. (2008) “Characteristics and prediction of RNA editing sites in transcripts of the moss Takakia lepidozioides chloroplast” on DNA Research is cited by Bell, D., et al (2019) “Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution” on American Journal of Botany.

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Kobayashi, E., Yura, K. & Nagai, Y. on Biophysics is cited by McCallum, M. (2019) on Nature Communications.

Kobayashi, E., Yura, K. & Nagai, Y. (2013) “Distinct conformation of ATP molecule in solution and on protein“ on Biophysics (Biophysics and Physicobiology) is cited by McCallum, M. (2019) “Multiple conformations facilitate PilT function in the type IV pilus“ on Nature Communications.

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Nakamura K, Kawabata T, Yura K, Go N. on FEBS Letters is cited by Arregui L., et al (2019) on Microbial Cell Factories.

Nakamura K, Kawabata T, Yura K, Go N.(2003) “Novel types of two-domain multi-copper oxidases: possible missing links in the evolution“ on FEBS Letters is cited by Arregui L., et al (2019)”Laccases: structure, function, and potential application in water bioremediation“ on Microbial Cell Factories.

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