{"id":16,"date":"2022-02-15T14:46:43","date_gmt":"2022-02-15T05:46:43","guid":{"rendered":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-entest\/?page_id=16"},"modified":"2025-01-23T03:01:22","modified_gmt":"2025-01-22T18:01:22","slug":"publications","status":"publish","type":"page","link":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/publications","title":{"rendered":"Publications"},"content":{"rendered":"

Original Papers in English<\/h3>\n
    \n
  1. \n

    Eranga Pawani Witharana*, Takaya Iwasaki<\/strong><\/span>, Myat Htoo San, Nadeeka U. Jayawardana, Nobuhiro Kotoda, Masashi Yamamoto, Yukio Nagano*. 2025. Comprehensive study of subfamily evolution through sequences of conserved nuclear genes and whole chloroplast genomes. Scientific Reports 15:687 https:\/\/doi.org\/10.1038\/s41598-024-83292-9<\/a><\/span><\/p>\n<\/li>\n

  2. \n

    Yayoi Takahashi<\/strong><\/span>, Masato Fujiwara, Masaaki Ozeki, Masayuki Saito, Takaya Iwasaki<\/strong><\/span>*. 2024. The complete chloroplast genome of Viola vaginata<\/em> (Violaceae), an endemic species of the snowy region in Japan. Mitochondrial DNA Part B 10:47\u201351 https:\/\/doi.org\/10.1080\/23802359.2024.2444595<\/a><\/span><\/p>\n<\/li>\n

  3. \n

    Haruka Mouri<\/strong><\/span>, Mizuki Tatsumi, Takako Nishino, Takeshi Suzuki, Tatsuyoshi Morita, Motomi Ito, Takaya Iwasaki<\/strong><\/span>*. 2024. The complete chloroplast genome of Taraxacum albidum<\/em> (Asteraceae), a Japanese endemic dandelion. Mitochondrial DNA Part B 9:1015\u20131019 https:\/\/doi.org\/10.1080\/23802359.2024.2387258<\/a><\/span><\/p>\n<\/li>\n

  4. \n

    Andr\u00e9 Guilherme Madeira, Yoshiaki Tsuda, Yukio Nagano, Takaya Iwasaki<\/strong><\/span>, Maria Zucchi, Tadashi Kajita, Gustavo Mori*. 2023. The role of oceanic currents in the dispersal and connectivity of the mangrove Rhizophora mangle on the Southwest Atlantic region. Molecular Ecology Resources. (Early View) https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/1755-0998.13807<\/a><\/span><\/p>\n<\/li>\n

  5. \n

    Tomoka Sakaba, Akiko Soejima*, Shinji Fujii, Hajime Ikeda, Takaya Iwasaki<\/strong><\/span>, Hiroaki Saito, Yoshihisa Suyama, Ayumi Matsuo, Andrey E. Kozhevnikov, Zoya V. Kozhevnikova, Hongfeng Wang, Siqi Wang, Jae-Hong Pak, Noriyuki Fujii. 2023. Phylogeography of the temperate grassland plant Tephroseris kirilowii (Asteraceae) inferred from multiplexed inter-simple sequence repeat genotyping by sequencing (MIG-seq) data. Journal of Plant Research. 136: 437\u2013452. https:\/\/link.springer.com\/article\/10.1007\/s10265-023-01452-w<\/span><\/p>\n<\/li>\n

  6. \n

    Naoko Emura*, Tomoaki Muranaka,\u00a0Takaya Iwasaki<\/strong><\/span>, Mie N Honjo, Atsushi J. Nagano, Yuji Isagi, Hiroshi Kudoh*. 2022. Effects of fruit dimorphism on genetic structure and gene flow in the coastal shrub\u00a0Scaevola taccada<\/em>.\u00a0Annals of Botany.\u00a0<\/em>https:\/\/academic.oup.com\/aob\/advance-article\/doi\/10.1093\/aob\/mcac138\/6935734<\/a><\/span>\u00a0DOI: 10.1093\/aob\/mcac138<\/p>\n<\/li>\n

  7. \n

    Xiao-Kai Fan, Jing Wu, Hans Peter Comes, Yu Feng, Ting Wang, Shu-Zhen Yang,\u00a0Takaya Iwasaki<\/strong><\/span>, Hong Zhu, Yun Jiang, Joongku Lee, Pan Li*. 2022. Phylogenomic, morphological, and niche differentiation analyses unveil species delimitation and evolutionary history of endangered maples in\u00a0Acer<\/em>\u00a0series\u00a0Campestria<\/em>\u00a0(Sapindaceae).\u00a0Journal of Systematics and Evolution<\/em>.\u00a0https:\/\/onlinelibrary.wiley.com\/doi\/full\/10.1111\/jse.12919<\/a><\/span><\/p>\n<\/li>\n

  8. \n

    Kanako Chimura, Shingo Akita*,\u00a0Takaya Iwasaki<\/strong><\/span>, Atsushi J. Nagano, Satoshi Shimada*. 2022. Phylogeography of a canopy-forming kelp,\u00a0Eisenia bicyclis<\/em>\u00a0(Laminariales, Phaeophyceae), based on genome-wide sequencing analysis.\u00a0Journal of Phycology<\/em>\u00a058: 318\u2013329.\u00a0https:\/\/doi.org\/10.1111\/jpy.13233<\/a><\/span><\/p>\n<\/li>\n

  9. \n

    Haruna Sata, Midori Shimizu,\u00a0Takaya Iwasaki<\/strong><\/span>, Hajime Ikeda, Akiko Soejima, Andrey E. Kozhevnikov, Zoya V. Kozhevnikova, Hyoung-Tak Im, Su-Kil Jang, Takayuki Azuma, Atsushi J. Nagano, Noriyuki Fujii*. 2021. Phylogeography of the East Asian grassland plant,\u00a0Viola orientalis<\/em>\u00a0(Violaceae), inferred from plastid and nuclear restriction site-associated DNA sequencing data.\u00a0Journal of Plant Research<\/em>\u00a0134: 1181\u20131198.\u00a0https:\/\/doi.org\/10.1007\/s10265-021-01339-8<\/a><\/span><\/p>\n<\/li>\n

  10. \n

    Ryosuke Nakadai*, Tommi Nyman, Koya Hashimoto,\u00a0Takaya Iwasaki<\/strong><\/span>, Anu Valtonen. 2021. Fundamental resource specialization of herbivorous butterflies decreases toward lower latitudes.\u00a0Journal of Biogeography<\/em>\u00a048: 2524\u20132537.\u00a0https:\/\/doi.org\/10.1111\/jbi.14218<\/a><\/span><\/p>\n<\/li>\n

  11. \n

    Kiwako S. Araki*, Michiaki Tsujimoto,\u00a0Takaya Iwasaki<\/strong><\/span>, Hiroshi Kudoh. 2021. Life-history monographs of Japanese plants:\u00a0Cardamine leucantha<\/em>\u00a0(Tausch) O. E. Schulz (Brassicaceae).\u00a0Plant Species Biology<\/em>\u00a036: 542\u2013553.\u00a0https:\/\/doi.org\/10.1111\/1442-1984.12345<\/a><\/span><\/p>\n<\/li>\n

  12. \n

    Asuka Koyama*, Kei Uchida, Masaaki Ozeki,\u00a0Takaya Iwasaki<\/strong><\/span>, Naoyuki Nakahama, Takeshi Suka. 2021. Conservation of endangered and rare plants requires strategies additional to deer-proof fencing for conservation of subalpine plant diversity.\u00a0Applied Vegetation Science<\/em>. 24(1): e12553. https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/avsc.12553<\/a><\/span><\/p>\n<\/li>\n

  13. \n

    Gustavo Maruyama Mori*, Andr\u00e9 Guilherme Madeira, Mariana Vargas Cruz, Yoshiaki Tsuda, Koji Takayama, Yu Matsuki, Yoshihisa Suyama,\u00a0Takaya Iwasaki<\/strong><\/span>, Anete Pereira de Souza, Maria Imaculada Zucchi, Tadashi Kajita*. 2021. Testing species hypotheses in the mangrove genus\u00a0Rhizophora<\/em>\u00a0from the Western hemisphere and South Pacific islands.\u00a0Estuarine, Coastal and Shelf Science<\/em>. 248: 106948. https:\/\/www.sciencedirect.com\/science\/article\/pii\/S027277142030679X<\/a><\/span><\/p>\n<\/li>\n

  14. \n

    Kei Uchida*, Asuka Koyama, Masaaki Ozeki,\u00a0Takaya Iwasaki<\/strong><\/span>, Naoyuki Nakahama, Takeshi Suka. 2020. Does the local conservation practice of cultural ecosystem services maintain plant diversity in semi-natural grasslands in Kirigamine Plateau, Japan?\u00a0Biological Conservation<\/em>. 250: 108737 .\u00a0 https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0006320720307953<\/a><\/span><\/p>\n<\/li>\n

  15. \n

    Naoyuki Nakahama*, Kei Uchida, Asuka Koyama,\u00a0Takaya Iwasaki<\/strong><\/span>, Masaaki Ozeki, Takeshi Suka. 2020. Construction of deer fences restores the diversity of butterflies and bumblebees as well as flowering plants in semi-natural grassland.\u00a0Biodiversity and Conservation.<\/em>\u00a029: 2201\u20132215. https:\/\/link.springer.com\/article\/10.1007\/s10531-020-01969-9<\/a><\/span><\/p>\n<\/li>\n

  16. \n

    Shunsuke Matsuoka*,\u00a0Takaya Iwasaki<\/strong><\/span>, Yoriko Sugiyama, Eri Kawaguchi, Hideyuki Doi, Takashi Osono. 2019. Biogeographic patterns of ectomycorrhizal fungal communities associated with\u00a0Castanopsis sieboldii<\/em>\u00a0across the Japanese archipelago.\u00a0Frontiers in Microbiology<\/em> 10: Article 2656. https:\/\/www.frontiersin.org\/articles\/10.3389\/fmicb.2019.02656\/full<\/a><\/span><\/p>\n<\/li>\n

  17. \n

    Honoka Kobayashi, Yuka Haino,\u00a0Takaya Iwasaki<\/strong><\/span>, Ayumi Tezuka, Atsushi J. Nagano, Satoshi Shimada*. 2018. DdRAD-seq based phylogeographic study of\u00a0Sargassum thunbergii<\/em>\u00a0(Phaeophyceae, Heterokonta) around Japanese coast.\u00a0Marine Environmental Research<\/em> 140: 104\u2013113. doi.org\/10.1016\/j.marenvres.2018.05.021. https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0141113618300850<\/a><\/span>
    \n<\/span><\/p>\n<\/li>\n

  18. \n

    Alison KS Wee*, Gustavo M Mori*, Catarina F Lira-Medeiros, Juan N\u00fa\u00f1ez-Farf\u00e1n, Koji Takayama, Leanne Faulks, Suhua Shi, Yoshiaki Tsuda, Yoshihisa Suyama, Takashi Yamamoto,\u00a0Takaya Iwasaki<\/strong><\/span>, Yukio Nagano, Zhengzhen Wang, Shin Watanabe, Tadashi Kajita. 2018. The integration and application of genomic information in mangrove conservation.\u00a0Conservation Biology<\/em>\u00a033: 206\u2013209. doi.org\/10.1111\/cobi.13140. https:\/\/conbio.onlinelibrary.wiley.com\/doi\/full\/10.1111\/cobi.13140<\/a><\/span><\/p>\n<\/li>\n

  19. \n

    Ryosuke Nakadai*, Koya Hashimoto,\u00a0Takaya Iwasaki<\/strong><\/span>, Yasuhiro Sato. 2018. Geographical co-occurrence of butterfly species: The importance of niche filtering by host plant species.\u00a0Oecologia<\/em>. 186: 995\u20131005. doi.org\/10.1007\/s00442-018-4062-1. https:\/\/link.springer.com\/article\/10.1007\/s00442-018-4062-1<\/a><\/span><\/p>\n<\/li>\n

  20. \n

    Akitaka Tono*,\u00a0Takaya Iwasaki<\/strong><\/span>, Akihiro Seo, Noriaki Murakami. 2016. Postglacial lineage admixture in the contact zones of the two Japanese deciduous broad-leaved tree species estimated by nuclear microsatellite and chloroplast DNA markers.\u00a0Acta Phytotaxonomica et Geobotanica<\/em>. 67: 1\u201316. https:\/\/www.jstage.jst.go.jp\/article\/apg\/67\/1\/67_KJ00010238482\/_article<\/a><\/span><\/p>\n<\/li>\n

  21. \n

    Shosei Kubota*,\u00a0Takaya Iwasaki<\/strong><\/span>, Kousuke Hanada, Atsushi J. Nagano, Asao Fujiyama, Atsushi Toyoda, Sumio Sugano, Yutaka Suzuki, Kouki Hikosaka, Motomi Ito, Shin-Ichi Morinaga. 2015. A genome scan for genes underlying microgeographic-scale local adaptation in a wild\u00a0Arabidopsis<\/em>\u00a0species.\u00a0PLOS Genetics<\/em> 11:e1005361. PLOS. e1005361. Published: July 14, 2015. DOI: 10.1371\/journal.pgen.1005361. https:\/\/journals.plos.org\/plosgenetics\/article?id=10.1371\/journal.pgen.1005361<\/a><\/span><\/p>\n<\/li>\n

  22. \n

    Akitaka Tono*,\u00a0Takaya Iwasaki<\/strong><\/span>, Akihiro Seo, Noriaki Murakami. 2015. Environmental factors contribute to the formation and maintenance of the contact zone observed in deciduous broad-leaved tree species in Japan.\u00a0Journal of Plant Research<\/em>. 128: 535\u2013551. https:\/\/link.springer.com\/article\/10.1007\/s10265-015-0722-y<\/a><\/span>
    \n<\/span><\/p>\n<\/li>\n

  23. \n

    Takaya Iwasaki<\/span>*<\/strong>, Tadashi Sase, Shohei Takeda, Takeshi A. Ohsawa, Kemrio Ozaki, Naoki Tani, Hiroyuki Ikeda, Masanori Suzuki, Ryota Endo, Kazuo Tohei, Yasuyuki Watano. 2013. Extensive selfing in an endangered population of\u00a0Pinus parviflora<\/em>\u00a0var.\u00a0parviflora<\/em>\u00a0(Pinaceae) in the Boso Hills, Japan.\u00a0Tree Genetics and Genomes<\/em>. 9: 693\u2013705. https:\/\/link.springer.com\/article\/10.1007\/s11295-012-0585-5<\/a><\/span><\/p>\n<\/li>\n

  24. \n

    Takaya Iwasaki<\/span>*<\/strong>, Kyoko Aoki, Akihiro Seo, Noriaki Murakami. 2012. Comparative phylogeography of four component species of deciduous broad-leaved forests in Japan based on chloroplast DNA variation.\u00a0Journal of Plant Research<\/em>. 125: 207\u2013221. https:\/\/link.springer.com\/article\/10.1007%2Fs10265-011-0428-8<\/a><\/span><\/p>\n<\/li>\n

  25. \n

    Takaya Iwasaki<\/span>*<\/strong>, Akitaka Tono, Kyoko Aoki, Akihiro Seo, Noriaki Murakami. 2010. Phylogeography of\u00a0Carpinus japonica<\/em>\u00a0Blume and\u00a0Carpinus tschonoskii<\/em>\u00a0Maxim. growing in Japanese deciduous broad-leaved forests, based on chloroplast DNA variation.\u00a0Acta Phytotaxonomica et Geobotanica<\/em>. 61: 1\u201320. https:\/\/www.jstage.jst.go.jp\/article\/apg\/61\/1\/61_KJ00006537150\/_article<\/a><\/span><\/p>\n<\/li>\n

  26. \n

    Takaya Iwasaki<\/span>*<\/strong>, Kyoko Aoki, Akihiro Seo, Noriaki Murakami. 2006. Intraspecific sequence variation of chloroplast DNA among the component species of deciduous broad-leaved forests in Japan.\u00a0Journal of Plant Research<\/em>. 119: 539\u2013552. https:\/\/link.springer.com\/article\/10.1007%2Fs10265-006-0010-y<\/a><\/span><\/p>\n<\/li>\n<\/ol>\n

     <\/p>\n","protected":false},"excerpt":{"rendered":"

    Original Papers in English Eranga Pawani Witharana*, Takaya Iwasaki, Myat Htoo San, Nadeeka U. Jayawardana, Nobuhiro Kotoda, Masashi Yamamoto, Yukio Nagano*. 2025. Comprehensive study of subfamily evolution through sequences of conserved nuclear genes and whole chloroplast genomes. Scientific Reports 15:687 https:\/\/doi.org\/10.1038\/s41598-024-83292-9 Yayoi Takahashi, Masato Fujiwara, Masaaki Ozeki, Masayuki Saito, Takaya Iwasaki*. 2024. The complete chloroplast genome of Viola vaginata (Violaceae), an endemic species of the snowy region in Japan. Mitochondrial DNA Part B 10:47\u201351 https:\/\/doi.org\/10.1080\/23802359.2024.2444595 Haruka Mouri, Mizuki Tatsumi, Takako Nishino, Takeshi Suzuki, Tatsuyoshi Morita, Motomi Ito, Takaya Iwasaki*. 2024. The complete chloroplast genome of Taraxacum albidum (Asteraceae), a Japanese endemic dandelion. Mitochondrial DNA Part B 9:1015\u20131019 https:\/\/doi.org\/10.1080\/23802359.2024.2387258 Andr\u00e9 Guilherme … Continue reading →<\/span><\/a><\/p>\n","protected":false},"author":43,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-16","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/pages\/16","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/users\/43"}],"replies":[{"embeddable":true,"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/comments?post=16"}],"version-history":[{"count":9,"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/pages\/16\/revisions"}],"predecessor-version":[{"id":102,"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/pages\/16\/revisions\/102"}],"wp:attachment":[{"href":"https:\/\/www-p.sci.ocha.ac.jp\/bio-iwasaki-lab-en\/wp-json\/wp\/v2\/media?parent=16"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}